creating heatmap and clustering
Creating Heatmaps and Clustering in R
In the R code above, the bluered() function [in gplots package] is used to generate a smoothly varying New What you'll learn to create colorful heatmaps showing the relationship between species and also gene expression levels between samples how to cluster species/genes in the data sets Requirements Description In this video the student will be able to use clustering methods to find clusters in his data. He will also be able to make nice-looking heatmaps using the heatmap and the pheatmap command. Clustering topics such as k-means clustering, PAM clustering, Silhouette plots, and elbow plots will be covered. Minimal familiarity with R coding is required. In this video the student will be able to use clustering methods to find clusters in his data.